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Convex factorization machine for toxicogenomics prediction

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DOI
10.1145/3097983.3098103
Yamada, Makoto; Lian, Wenzhao; Goyal, Amit; Chen, Jianhui; Wimalawarne, Kishan; Khan, Suleiman A.; K...
ACM SIGKDD International Conference on Knowledge Discovery and Data Mining2017Publicationer information ikon

TinderMIX: Time-dose integrated modelling of toxicogenomics data

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DOI
10.1093/gigascience/giaa055
Serra, Angela;Fratello, Michele;Del Giudice, Giusy;Saarimäki, Laura Aliisa;Paci, Michelangelo;Federi...
Gigascience2020Publicationer information ikon

Nextcast: A software suite to analyse and model toxicogenomics data

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DOI
10.1016/j.csbj.2022.03.014
Serra, Angela; Saarimäki, Laura Aliisa; Pavel, Alisa; del Giudice, Giusy; Fratello, Michele; Cattela...
Computational and Structural Biotechnology Journal2022Publicationer information ikon

Transcriptomics in Toxicogenomics, Part III : Data Modelling for Risk Assessment

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DOI
10.3390/nano10040708
Serra, Angela; Fratello, Michele; Cattelani, Luca; Liampa, Irene; Melagraki, Georgia; Kohonen, Pekka...
Nanomaterials2020Publicationer information ikon

Toxicogenomics Data for Chemical Safety Assessment and Development of New Approach Methodologies: An Adverse Outcome Pathway-Based Approach

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DOI
10.1002/advs.202203984
Saarimäki, Laura Aliisa; Morikka, Jack; Pavel, Alisa; Korpilähde, Seela; del Giudice, Giusy; Federic...
Advanced science2022Publicationer information ikon

Prospects and challenges for FAIR toxicogenomics data

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DOI
10.1038/s41565-021-01049-1
Saarimaki, Laura A.; Melagraki, Georgia; Afantitis, Antreas; Lynch, Iseult.; Greco, Dario
Nature nanotechnology2021Publicationer information ikon

Cross-organism toxicogenomics with group factor analysis

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Suvitaival, Tommi; Parkkinen, Juuso; Virtanen, Seppo; Kaski, Samuel
Systems Biomedicine2014Publicationer information ikon

Cross-organism toxicogenomics with group factor analysis

Referentgranskad
Suvitaival, Tommi; Parkkinen, Juuso; Virtanen, Seppo; Kaski, Samuel
Systems Biomedicine2014Publicationer information ikon

Transcriptomics in Toxicogenomics, Part II: Preprocessing and Differential Expression Analysis for High Quality Data

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DOI
10.3390/nano10050903
Federico, Antonio; Serra, Angela; Ha, My Kieu; Kohonen, Pekka; Choi, Jang-Sik; Liampa, Irene; Nymark...
Nanomaterials2020Publicationer information ikon

Transcriptomics in Toxicogenomics, Part I : Experimental Design, Technologies, Publicly Available Data, and Regulatory Aspects

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DOI
10.3390/nano10040750
Kinaret, Pia Anneli Sofia; Serra, Angela; Federico, Antonio; Kohonen, Pekka; Nymark, Penny; Liampa, ...
Nanomaterials2020

Convex factorization machine for toxicogenomics prediction

Referentgranskad
DOI
10.1145/3097983.3098103
2017

TinderMIX: Time-dose integrated modelling of toxicogenomics data

Referentgranskad
Öppen tillgång
DOI
10.1093/gigascience/giaa055
2020

Nextcast: A software suite to analyse and model toxicogenomics data

Referentgranskad
Öppen tillgång
DOI
10.1016/j.csbj.2022.03.014
2022

Transcriptomics in Toxicogenomics, Part III : Data Modelling for Risk Assessment

Referentgranskad
Öppen tillgång
DOI
10.3390/nano10040708
2020

Toxicogenomics Data for Chemical Safety Assessment and Development of New Approach Methodologies: An Adverse Outcome Pathway-Based Approach

Referentgranskad
Öppen tillgång
DOI
10.1002/advs.202203984
2022

Prospects and challenges for FAIR toxicogenomics data

Öppen tillgång
DOI
10.1038/s41565-021-01049-1
2021

Cross-organism toxicogenomics with group factor analysis

Referentgranskad
2014

Cross-organism toxicogenomics with group factor analysis

Referentgranskad
2014

Transcriptomics in Toxicogenomics, Part II: Preprocessing and Differential Expression Analysis for High Quality Data

Referentgranskad
Öppen tillgång
DOI
10.3390/nano10050903
2020

Transcriptomics in Toxicogenomics, Part I : Experimental Design, Technologies, Publicly Available Data, and Regulatory Aspects

Referentgranskad
Öppen tillgång
DOI
10.3390/nano10040750
2020